STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM10Tripartite motif containing 10. (480 aa)    
Predicted Functional Partners:
TRIM44
Tripartite motif containing 44.
    
 
 0.835
TRIM35
Tripartite motif containing 35.
   
 
 0.781
ANKRD11
Ankyrin repeat domain 11.
    
 0.603
FAM193B
Family with sequence similarity 193 member B.
    
  0.593
TTC23
Tetratricopeptide repeat domain 23.
    
   0.548
MARCHF7
Membrane associated ring-CH-type finger 7.
      
 0.546
KEL
Kell metallo-endopeptidase (Kell blood group).
   
    0.544
UBE2D1
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.526
PRR3
Proline rich 3.
    
 
 0.524
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
      
 0.517
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.