STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM15Tripartite motif containing 15. (478 aa)    
Predicted Functional Partners:
MAVS
Mitochondrial antiviral signaling protein.
   
 0.733
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.581
TRIM8
Tripartite motif containing 8.
    
 
 0.558
BDKRB2
Bradykinin receptor B2; Belongs to the G-protein coupled receptor 1 family.
      
 0.462
FLNB
Filamin B.
    
 0.448
ZNF395
Zinc finger protein 395.
     
 0.425
USP43
Ubiquitin specific peptidase 43; Belongs to the peptidase C19 family.
    
 
 0.409
S100A4
Protein S100; Belongs to the S-100 family.
    
 0.407
LOC100654836
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
   
 0.400
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.