STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP1AMicrotubule associated protein 1A. (2228 aa)    
Predicted Functional Partners:
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
   
 
 0.871
SQSTM1
Sequestosome 1.
    
 
 0.729
GABARAPL2
GABA type A receptor associated protein like 2.
    
 
 0.605
ATG12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 
 0.592
BNIP3L
BCL2 interacting protein 3 like.
      
 0.581
BNIP3
BCL2 interacting protein 3.
      
 0.580
FUNDC1
FUN14 domain containing 1.
      
 0.580
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.562
ATG3
Autophagy-related protein 3.
    
 
 0.553
CALCOCO2
Calcium binding and coiled-coil domain 2.
      
 0.526
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.