STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAP1AMicrotubule associated protein 1A. (2228 aa)    
Predicted Functional Partners:
MAP1B
Microtubule associated protein 1B.
   
 0.901
MAP1S
Microtubule associated protein 1S.
     
  0.870
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
   
 
 0.834
MAPT
Microtubule-associated protein.
   
 
 0.734
MAP1LC3B
Uncharacterized protein.
    
 
 0.692
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 
 0.692
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.679
ATG12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 
 0.674
SQSTM1
Sequestosome 1.
   
 
 0.671
GABARAPL2
GABA type A receptor associated protein like 2.
    
 
 0.631
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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