STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RESF1Retroelement silencing factor 1. (1524 aa)    
Predicted Functional Partners:
KIAA0355
KIAA0355.
      
 0.588
PHC1
Polyhomeotic homolog 1.
      
 0.588
LRATD1
LRAT domain containing 1.
      
 0.525
DOP1A
DOP1 leucine zipper like protein A.
      
 0.525
DOP1B
DOP1 leucine zipper like protein B.
      
 0.525
ARHGEF10L
Rho guanine nucleotide exchange factor 10 like.
      
 0.514
ARMCX5
Armadillo repeat containing X-linked 5.
  
     0.501
USO1
USO1 vesicle transport factor.
      
 0.501
IL12RB2
Interleukin 12 receptor subunit beta 2.
  
     0.498
RSAD1
Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
      
 0.495
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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