STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC68Coiled-coil domain containing 68. (335 aa)    
Predicted Functional Partners:
CEP170
Centrosomal protein 170.
    
 0.953
NIN
Uncharacterized protein.
    
 
 0.933
CCDC120
Coiled-coil domain containing 120.
     
 0.824
G3T9Y3_LOXAF
Uncharacterized protein.
    
 
 0.786
CEP128
Centrosomal protein 128.
     
 0.783
CNTRL
Centriolin.
     
 0.749
STARD6
StAR related lipid transfer domain containing 6.
      
 0.730
CEP170B
Centrosomal protein 170B.
    
 
 0.722
CPLX4
Complexin 4.
      
 0.673
CCDC6
Coiled-coil domain containing 6.
      
 0.634
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.