STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFYCNuclear transcription factor Y subunit gamma. (336 aa)    
Predicted Functional Partners:
NFYB
Nuclear transcription factor Y subunit beta.
   
 0.997
NFYA
Nuclear transcription factor Y subunit alpha.
    
 0.997
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.881
GATA3
GATA binding protein 3.
   
 
 0.592
GATA2
GATA binding protein 2.
   
 
 0.592
REPIN1
Replication initiator 1.
    
 
 0.584
TAF12
TATA-box binding protein associated factor 12.
   
 
 0.574
RFXANK
Regulatory factor X associated ankyrin containing protein.
    
 
 0.500
NLRC5
Uncharacterized protein.
      
 0.450
CEBPZ
CCAAT enhancer binding protein zeta.
      
 0.443
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.