STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NFYCNuclear transcription factor Y subunit gamma. (336 aa)    
Predicted Functional Partners:
NFYB
Nuclear transcription factor Y subunit beta.
   
 0.999
NFYA
Nuclear transcription factor Y subunit alpha.
    
 0.998
CIITA
Class II major histocompatibility complex transactivator.
     
 0.909
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.843
PON1
Paraoxonase 1.
    
   0.786
PON3
Paraoxonase 3.
    
   0.667
PON2
Paraoxonase 2.
    
   0.667
TAF12
TATA-box binding protein associated factor 12.
   
 
 0.658
NLRC5
Uncharacterized protein.
     
 0.657
REPIN1
Replication initiator 1.
    
 0.649
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.