STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC25Coiled-coil domain containing 25. (208 aa)    
Predicted Functional Partners:
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
      
 0.680
TMEM115
Transmembrane protein 115.
      
 0.679
CCDC137
Coiled-coil domain containing 137.
      
 0.666
UBL7
Ubiquitin like 7.
      
 0.649
MORN5
MORN repeat containing 5.
      
 0.617
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.596
CDADC1
Cytidine and dCMP deaminase domain containing 1.
      
 0.566
TMEM184A
Transmembrane protein 184A.
      
 0.545
TMEM135
Transmembrane protein 135.
      
 0.531
SRD5A3
Steroid 5 alpha-reductase 3.
      
 0.490
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.