Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PNMA1PNMA family member 1. (353 aa)    
Predicted Functional Partners:
CDR2L
Cerebellar degeneration related protein 2 like.
      
 0.737
OGDHL
Oxoglutarate dehydrogenase like.
      
 0.693
G3U379_LOXAF
Uncharacterized protein.
   
 0.682
ZIC4
Zic family member 4.
   
 0.650
DNER
Delta/notch like EGF repeat containing.
   
 0.621
ARHGAP26
Rho GTPase activating protein 26.
    
 
 0.618
FANCM
FA complementation group M.
    
 0.607
THOC1
THO complex 1.
    
 
 0.589
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.563
ASB5
Ankyrin repeat and SOCS box containing 5.
   
 0.541
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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