STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKFN1Ankyrin repeat and fibronectin type III domain containing 1. (760 aa)    
Predicted Functional Partners:
G3UED5_LOXAF
Uncharacterized protein.
 
      0.890
SYNGR2
MARVEL domain-containing protein.
      
 0.485
SMG8
SMG8 nonsense mediated mRNA decay factor.
      
 0.422
AATF
Apoptosis antagonizing transcription factor.
      
 0.419
C1orf194
Chromosome 1 open reading frame 194.
      
 0.417
MRM1
Mitochondrial rRNA methyltransferase 1.
      
 0.417
C17orf67
Chromosome 17 open reading frame 67.
      
 0.417
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.