STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA5BSemaphorin 5B. (1151 aa)    
Predicted Functional Partners:
SEMA5A
Semaphorin 5A.
  
  
 
0.901
SLC49A4
Solute carrier family 49 member 4.
      
 0.658
IQCK
IQ motif containing K.
      
 0.658
CCDC150
Coiled-coil domain containing 150.
      
 0.647
PLXNB3
Plexin B3.
    
0.628
PLXNB1
Plexin B1.
    
0.628
IDH2
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
      
 0.607
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.605
PLXNB2
Sema domain-containing protein.
    
0.596
MST1R
Macrophage stimulating 1 receptor.
    
 0.596
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.