STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC3HC1Zinc finger C3HC-type containing 1. (504 aa)    
Predicted Functional Partners:
CUL1
Cullin 1; Belongs to the cullin family.
    
  0.877
RBX1
Ring-box 1.
    
 0.797
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.772
G3U9C6_LOXAF
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.772
G3ULX5_LOXAF
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.772
ADCY7
Adenylate cyclase type 7; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
      
 0.737
TPR
Translocated promoter region, nuclear basket protein.
    
 0.727
RNF166
Ring finger protein 166.
    
 
 0.710
CCNB2
Cyclin B2; Belongs to the cyclin family.
    
 
 0.702
CCNB1
Cyclin B1; Belongs to the cyclin family.
    
 
 0.702
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.