STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF25Transcription factor 25. (623 aa)    
Predicted Functional Partners:
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
 
 0.825
GPRASP2
G protein-coupled receptor associated sorting protein 2.
    
 
 0.808
NEMF
Nuclear export mediator factor.
    
 
 0.807
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
  
 0.745
ANKZF1
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
   
 
 0.689
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.689
ZNF598
Zinc finger protein 598.
      
 0.647
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 
 0.607
ERMN
Ermin.
    
 
 0.585
SPIRE2
Spire type actin nucleation factor 2.
 
  
 
 0.566
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.