STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD1ATPase family AAA domain containing 1; Belongs to the AAA ATPase family. (361 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.946
PEX19
Uncharacterized protein.
    
 0.817
PEX3
Peroxisomal biogenesis factor 3.
    
 0.795
PEX13
Peroxisomal biogenesis factor 13.
    
 0.747
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.745
PEX14
Peroxisomal biogenesis factor 14.
    
 0.735
ABCD3
ATP binding cassette subfamily D member 3.
     
 0.725
PEX16
Peroxisomal membrane protein PEX16.
     
 0.724
SLC25A17
Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.713
PGM3
Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family.
 
  
  0.699
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.