Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TTLL11Tubulin tyrosine ligase like 11. (491 aa)    
Predicted Functional Partners:
FBXW2
F-box and WD repeat domain containing 2.
      
 0.687
TTLL5
Tubulin tyrosine ligase like 5.
   
  
 0.683
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
      
 0.658
LCN9
Lipocalin 9; Belongs to the calycin superfamily. Lipocalin family.
      
 0.625
PSMD5
Proteasome 26S subunit, non-ATPase 5.
      
 0.597
ZSCAN20
Zinc finger and SCAN domain containing 20.
      
 0.596
DAB2IP
DAB2 interacting protein.
      
 0.577
RAB14
RAB14, member RAS oncogene family.
      
 0.576
POC5
POC5 centriolar protein.
      
 0.569
ZNF362
Zinc finger protein 362.
      
 0.561
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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