STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRCH3Leucine rich repeats and calponin homology domain containing 3. (777 aa)    
Predicted Functional Partners:
DOCK8
Dedicator of cytokinesis 8; Belongs to the DOCK family.
   
 
 0.932
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
   
   0.930
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.830
LRCH4
Leucine rich repeats and calponin homology domain containing 4.
   
   0.824
DOCK7
Dedicator of cytokinesis 7; Belongs to the DOCK family.
   
 
 0.774
DOCK6
Dedicator of cytokinesis 6; Belongs to the DOCK family.
   
 
 0.774
RPS21
Ribosomal protein S21.
    
   0.772
NUDCD1
NudC domain containing 1.
    
   0.764
LRCH2
Leucine rich repeats and calponin homology domain containing 2.
    
   0.729
DYRK1A
Dual specificity tyrosine phosphorylation regulated kinase 1A.
   
   0.617
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.