STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPRMReprimo, TP53 dependent G2 arrest mediator homolog. (109 aa)    
Predicted Functional Partners:
PRPF40A
Pre-mRNA processing factor 40 homolog A.
      
 0.627
GALNT13
Polypeptide N-acetylgalactosaminyltransferase 13.
      
 0.627
KCNJ3
Potassium voltage-gated channel subfamily J member 3.
      
 0.626
ARL6IP6
ADP ribosylation factor like GTPase 6 interacting protein 6.
      
 0.620
TAL2
TAL bHLH transcription factor 2.
      
 0.598
FMNL2
Formin like 2.
      
 0.591
ZNF281
Zinc finger protein 281.
      
 0.577
NPBWR1
Neuropeptides B and W receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.545
G3TQ33_LOXAF
Uncharacterized protein.
      
 0.489
WFIKKN1
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1.
      
 0.419
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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