STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLCN3Chloride channel protein. (866 aa)    
Predicted Functional Partners:
CLCN5
Chloride channel protein.
   
  0.994
CLCN4
Chloride channel protein.
   
  0.977
WWC3
WWC family member 3.
 
 
  0.867
EXOSC10
Exosome component 10.
     
 0.804
G3UH79_LOXAF
Uncharacterized protein.
      
 0.799
SLC17A9
Uncharacterized protein.
      
 0.737
TMEM9B
TMEM9 domain family member B.
    
 
 0.719
NMNAT3
Nicotinamide-nucleotide adenylyltransferase.
      
 0.696
DECR2
2,4-dienoyl-CoA reductase 2.
      
 0.624
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
   
 0.623
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.