STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N6AMT1N-6 adenine-specific DNA methyltransferase 1. (214 aa)    
Predicted Functional Partners:
TRMT112
tRNA methyltransferase subunit 11-2.
    
 0.999
ETF1
Eukaryotic translation termination factor 1.
    
 0.889
CPOX
Uncharacterized protein.
   
 
 0.865
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.864
METTL4
Methyltransferase like 4; Belongs to the MT-A70-like family.
      
 0.838
MTRF1
RF_PROK_I domain-containing protein.
  
 
 0.792
G3TT88_LOXAF
PCRF domain-containing protein.
  
 
 0.792
MTRF1L
Mitochondrial translational release factor 1 like.
  
 
 0.774
FBXO5
F-box protein 5.
  
 
 0.761
C12orf65
Chromosome 12 open reading frame 65.
  
 
 0.761
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.