STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC22ASEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. (307 aa)    
Predicted Functional Partners:
BET1
Bet1 golgi vesicular membrane trafficking protein.
   
 0.931
GOSR2
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.915
STX5
Syntaxin 5; Belongs to the syntaxin family.
   
 0.914
STX18
Syntaxin 18.
   
 0.885
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
    
 0.862
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.861
SEC24A
SEC24 homolog A, COPII coat complex component.
    
 0.858
SEC24B
SEC24 homolog B, COPII coat complex component.
    
 0.858
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
    
 0.846
GOLGA2
Uncharacterized protein.
     
 0.817
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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