STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMJD1CJumonji domain containing 1C. (2360 aa)    
Predicted Functional Partners:
KDM4B
Lysine demethylase 4B.
     
 0.597
NIPBL
Nipped-B protein.
   
  
 0.540
KDM4C
Lysine demethylase 4C.
     
 0.536
KDM4A
Uncharacterized protein.
     
 0.536
REEP3
Receptor expression-enhancing protein.
 
    
 0.527
KDM7A
Lysine demethylase 7A.
   
 
 0.508
TMEM37
Transmembrane protein 37.
      
 0.451
KMT2E
Lysine methyltransferase 2E.
   
  
 0.430
PHF8
PHD finger protein 8.
   
 
 0.418
PHF2
PHD finger protein 2.
   
 
 0.418
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.