STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ESRP1Epithelial splicing regulatory protein 1. (681 aa)    
Predicted Functional Partners:
RBPMS
RNA binding protein, mRNA processing factor.
    
 
 0.863
ESRP2
Epithelial splicing regulatory protein 2.
   
 
  0.769
ENAH
ENAH actin regulator.
   
  
 0.685
QKI
QKI, KH domain containing RNA binding.
    
 0.683
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
     
 0.624
SFSWAP
Splicing factor SWAP.
      
 0.622
BSND
Barttin CLCNK type accessory beta subunit.
      
 0.618
RAB25
RAB25, member RAS oncogene family.
   
 
 0.609
CTNND1
Catenin delta 1.
   
  
 0.606
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.585
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.