STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SNR1_LOXAFUncharacterized protein. (353 aa)    
Predicted Functional Partners:
G3UET6_LOXAF
Doublecortin domain-containing protein.
 
      0.827
ELP4
Elongator acetyltransferase complex subunit 4.
      
 0.711
IMMP1L
Mitochondrial inner membrane protease subunit.
      
 0.507
G3U3C4_LOXAF
Uncharacterized protein.
      
 0.507
DCX
Doublecortin.
   
  
 0.500
LEKR1
Uncharacterized protein.
  
     0.467
PAX6
Paired box 6.
      
 0.415
MPPED2
Metallophosphoesterase domain containing 2.
      
 0.407
MPPED1
Metallophosphoesterase domain containing 1.
      
 0.407
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.