STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3SNS3_LOXAFUncharacterized protein. (381 aa)    
Predicted Functional Partners:
G3T428_LOXAF
Uncharacterized protein.
      
0.673
HGD
Homogentisate 1,2-dioxygenase.
      
 0.534
PJVK
Pejvakin.
      
 0.523
GSDME
Gasdermin E.
      
 0.499
IKZF3
IKAROS family zinc finger 3.
      
 0.457
G3T690_LOXAF
Uncharacterized protein.
      
 0.454
ZPBP
Zona pellucida binding protein.
      
 0.448
LRRC3C
Leucine rich repeat containing 3C.
      
 0.442
PGAP3
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
   
  
 0.408
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.