STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXA2Homeobox A2. (375 aa)    
Predicted Functional Partners:
PBX1
PBX homeobox 1.
    
 0.687
HOXA3
Homeobox A3.
   
  
0.675
STMN3
Stathmin; Belongs to the stathmin family.
    
 
 0.562
HOXA5
Homeobox A5.
  
 
0.523
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
      
 0.499
ROBO2
Roundabout guidance receptor 2.
   
 
 0.482
HOXB5
Homeobox B5.
  
 
0.478
RELN
Reelin.
      
 0.453
MEIS2
Meis homeobox 2.
   
 0.442
HOXA4
Homeobox A4.
   
 
0.439
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.