STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OTOSOtospiralin. (89 aa)    
Predicted Functional Partners:
PGAP1
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi.
      
 0.581
ADGRG4
Adhesion G protein-coupled receptor G4; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.561
ATP2B2
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
      
 0.558
SAMD7
Sterile alpha motif domain containing 7.
   
  
 0.517
COPS9
Uncharacterized protein.
      
 0.491
SEC62
SEC62 homolog, preprotein translocation factor.
      
 0.481
ALAS2
5-aminolevulinate synthase.
      
 0.480
SKIL
SKI like proto-oncogene.
   
  
 0.466
LDLRAD2
Low density lipoprotein receptor class A domain containing 2.
   
    0.464
C17orf67
Chromosome 17 open reading frame 67.
      
 0.460
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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