LTBP2 protein (Loxodonta africana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LTBP2

Latent transforming growth factor beta binding protein 2. (1824 aa)

Predicted Functional Partners:

TGFB1

0.880

TGFB3

0.732

THBS1

0.731

BGN

0.679

TGFB2

0.675

FKBP10

0.667

CHD7

0.667

COL16A1

0.634

MRGPRF

0.629

PRRX1

0.619

Your Current Organism:

Loxodonta africana

NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BGN	COL16A1	ENSLAFP00000001846	ENSLAFP00000008406	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Collagen type XVI alpha 1 chain.	0.460
BGN	FKBP10	ENSLAFP00000001846	ENSLAFP00000016595	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Peptidylprolyl isomerase.	0.597
BGN	LTBP2	ENSLAFP00000001846	ENSLAFP00000001345	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Latent transforming growth factor beta binding protein 2.	0.679
BGN	MRGPRF	ENSLAFP00000001846	ENSLAFP00000006491	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	MAS related GPR family member F; Belongs to the G-protein coupled receptor 1 family.	0.546
BGN	PRRX1	ENSLAFP00000001846	ENSLAFP00000006210	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Paired related homeobox 1.	0.554
BGN	TGFB1	ENSLAFP00000001846	ENSLAFP00000006447	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.636
BGN	TGFB2	ENSLAFP00000001846	ENSLAFP00000001973	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.418
BGN	TGFB3	ENSLAFP00000001846	ENSLAFP00000017656	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.459
BGN	THBS1	ENSLAFP00000001846	ENSLAFP00000002214	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	Thrombospondin 1.	0.425
CHD7	LTBP2	ENSLAFP00000026067	ENSLAFP00000001345	Chromodomain helicase DNA binding protein 7.	Latent transforming growth factor beta binding protein 2.	0.667
COL16A1	BGN	ENSLAFP00000008406	ENSLAFP00000001846	Collagen type XVI alpha 1 chain.	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.460
COL16A1	LTBP2	ENSLAFP00000008406	ENSLAFP00000001345	Collagen type XVI alpha 1 chain.	Latent transforming growth factor beta binding protein 2.	0.634
COL16A1	MRGPRF	ENSLAFP00000008406	ENSLAFP00000006491	Collagen type XVI alpha 1 chain.	MAS related GPR family member F; Belongs to the G-protein coupled receptor 1 family.	0.590
COL16A1	PRRX1	ENSLAFP00000008406	ENSLAFP00000006210	Collagen type XVI alpha 1 chain.	Paired related homeobox 1.	0.439
COL16A1	TGFB3	ENSLAFP00000008406	ENSLAFP00000017656	Collagen type XVI alpha 1 chain.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.499
COL16A1	THBS1	ENSLAFP00000008406	ENSLAFP00000002214	Collagen type XVI alpha 1 chain.	Thrombospondin 1.	0.478
FKBP10	BGN	ENSLAFP00000016595	ENSLAFP00000001846	Peptidylprolyl isomerase.	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.	0.597
FKBP10	LTBP2	ENSLAFP00000016595	ENSLAFP00000001345	Peptidylprolyl isomerase.	Latent transforming growth factor beta binding protein 2.	0.667
FKBP10	MRGPRF	ENSLAFP00000016595	ENSLAFP00000006491	Peptidylprolyl isomerase.	MAS related GPR family member F; Belongs to the G-protein coupled receptor 1 family.	0.737
FKBP10	PRRX1	ENSLAFP00000016595	ENSLAFP00000006210	Peptidylprolyl isomerase.	Paired related homeobox 1.	0.702

page 1 of 4

Server load: low (30%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About