STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARL6IP6ADP ribosylation factor like GTPase 6 interacting protein 6. (226 aa)    
Predicted Functional Partners:
PRPF40A
Pre-mRNA processing factor 40 homolog A.
      
 0.781
KCNJ3
Potassium voltage-gated channel subfamily J member 3.
      
 0.734
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
   0.709
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
   0.709
GALNT13
Polypeptide N-acetylgalactosaminyltransferase 13.
      
 0.700
RFTN2
Raftlin family member 2.
      
 0.694
PLBD2
Phospholipase B-like; Putative phospholipase.
      
 0.671
FMNL2
Formin like 2.
      
 0.660
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.642
RPRM
Reprimo, TP53 dependent G2 arrest mediator homolog.
      
 0.620
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.