STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNGA3Cyclic nucleotide gated channel subunit alpha 3. (669 aa)    
Predicted Functional Partners:
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
  
0.956
CNGB1
Cyclic nucleotide-binding domain-containing protein.
  
0.909
GNAT2
G protein subunit alpha transducin 2.
   
 
 0.899
GNGT2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.863
PDE6C
Phosphodiesterase.
   
 0.836
G3UJY4_LOXAF
Uncharacterized protein.
   
 0.780
PDE6B
Phosphodiesterase.
   
 0.763
OPN4
Opsin 4.
   
 
 0.745
PDE6H
Phosphodiesterase 6H.
   
  
 0.736
SIX6
SIX homeobox 6.
      
 0.733
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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