STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUS7LPseudouridine synthase 7 like. (702 aa)    
Predicted Functional Partners:
NOC3L
Nucleolar complex protein 3 homolog.
   
   0.812
PUS3
Pseudouridine synthase 3.
   
 
 0.805
TRUB2
TruB pseudouridine synthase family member 2.
   
  
 0.777
RPUSD4
RNA pseudouridine synthase D4.
   
 
 0.774
RPUSD1
RNA pseudouridine synthase domain containing 1.
   
 
 0.771
RPUSD3
RNA pseudouridine synthase D3.
   
 
 0.770
PNPO
Pyridoxamine 5'-phosphate oxidase.
      
 0.736
PUSL1
tRNA pseudouridine synthase.
   
 
 0.729
PUS1
Pseudouridine synthase 1.
   
 
 0.716
RPUSD2
RNA pseudouridine synthase domain containing 2.
   
 
 0.699
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.