Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM33Tripartite motif containing 33. (954 aa)    
Predicted Functional Partners:
SMAD4
Mothers against decapentaplegic homolog.
   
 0.991
TRIM24
Tripartite motif containing 24.
    
 
 0.933
CDC27
Cell division cycle 27.
   
 0.931
CCNA2
Cyclin A2; Belongs to the cyclin family.
   
 
 0.928
FZR1
Fizzy and cell division cycle 20 related 1.
   
   0.928
CDC16
Cell division cycle 16.
    
   0.927
CDC23
Cell division cycle 23.
    
   0.927
ANAPC7
Anaphase promoting complex subunit 7.
    
   0.927
ANAPC5
Anaphase promoting complex subunit 5.
    
   0.927
BUB1B
Uncharacterized protein.
    
   0.927
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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