STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRPAP1LDL receptor related protein associated protein 1. (324 aa)    
Predicted Functional Partners:
LRP2
LDL receptor related protein 2.
    
 0.959
LRP1
LDL receptor related protein 1.
    
 0.941
SORL1
Sortilin related receptor 1.
    
 
 0.714
SMIM14
Small integral membrane protein 14.
      
 0.587
RAPGEF4
Rap guanine nucleotide exchange factor 4.
      
 0.587
RCC1L
RCC1 like.
      
 0.580
LRP8
LDL receptor related protein 8.
    
 
 0.579
SORT1
Sortilin.
    
 
 0.564
VLDLR
Very low density lipoprotein receptor.
    
 
 0.558
MESD
Mesoderm development LRP chaperone.
   
 
 0.551
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.