STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN11Tetraspanin. (253 aa)    
Predicted Functional Partners:
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 0.895
ITGB4
Integrin beta.
   
 0.863
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.862
CD9
Tetraspanin.
    
 0.802
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.796
GRAMD1C
GRAM domain containing 1C.
    
   0.783
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.690
CMTM6
CKLF like MARVEL transmembrane domain containing 6.
      
 0.672
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
    
 0.634
HOXB2
Homeobox B2.
      
 0.602
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.