STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC8Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (764 aa)    
Predicted Functional Partners:
TCF20
Transcription factor 20.
     
 0.775
GOLGA7B
Golgin A7 family member B.
   
 0.738
GOLGA7
Golgin A7.
   
 0.738
DGCR2
DiGeorge syndrome critical region gene 2.
   
  
 0.738
ZDHHC13
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.735
BRD1
Bromodomain containing 1.
   
  
 0.715
ZDHHC7
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
  
 0.694
CLDND1
Claudin domain containing 1.
    
   0.668
ZDHHC17
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.632
ZDHHC4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.598
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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