STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC8Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (764 aa)    
Predicted Functional Partners:
DGCR2
DiGeorge syndrome critical region gene 2.
   
  
 0.632
GOLGA7B
Golgin A7 family member B.
   
 0.631
GOLGA7
Golgin A7.
   
 0.631
BRD1
Bromodomain containing 1.
   
  
 0.609
TCF20
Transcription factor 20.
      
 0.588
ZDHHC13
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.542
ZDHHC7
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
 
 
  
0.475
ABCA1
ATP binding cassette subfamily A member 1.
   
 
  0.466
ABCA2
ATP binding cassette subfamily A member 2.
   
 
  0.466
ZDHHC17
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.461
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.