STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SP06_LOXAFUncharacterized protein. (1523 aa)    
Predicted Functional Partners:
ITFG2
Integrin alpha FG-GAP repeat containing 2.
     
 0.932
C12orf66
Chromosome 12 open reading frame 66.
     
 0.834
KPTN
Kaptin, actin binding protein.
     
 0.796
RHBDL2
Rhomboid-related protein 2; Involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
      
 0.682
DGKE
Diacylglycerol kinase.
      
 0.594
C17orf67
Chromosome 17 open reading frame 67.
      
 0.572
MTRR
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
      
 0.564
OTUD3
OTU deubiquitinase 3.
      
 0.554
MBTPS1
Membrane bound transcription factor peptidase, site 1.
      
 0.552
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
     
 0.545
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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