Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSFL1CNSFL1 cofactor. (372 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.997
UBXN6
UBX domain protein 6.
    
 0.994
UBXN2A
UBX domain protein 2A.
    
  0.990
VCPIP1
Valosin containing protein interacting protein 1.
   
 
 0.971
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 
 0.970
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 
 0.969
ASPSCR1
TUG-UBL1 domain-containing protein.
    
 0.963
FAF1
Fas associated factor 1.
    
 0.962
UBXN7
UBX domain-containing protein 7.
   
 
 0.954
UBXN10
UBX domain protein 10.
    
 
 0.949
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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