Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFPL1Zinc finger protein like 1. (310 aa)    
Predicted Functional Partners:
VAPA
VAMP associated protein A.
   
 
 0.801
G3SV42_LOXAF
ACB domain-containing protein.
    
 
 0.667
ACBD5
Acyl-CoA binding domain containing 5.
    
 
 0.667
TM9SF3
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.663
PITPNM1
Phosphatidylinositol transfer protein membrane associated 1.
    
 
 0.637
FAM91A1
Family with sequence similarity 91 member A1.
      
 0.625
TMF1
TATA element modulatory factor 1.
      
 0.622
VAPB
VAMP associated protein B and C.
   
 
 0.589
RAD9A
Cell cycle checkpoint control protein; Belongs to the rad9 family.
      
 0.572
OSBPL2
Oxysterol-binding protein; Belongs to the OSBP family.
    
   0.561
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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