STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
API5Apoptosis inhibitor 5. (503 aa)    
Predicted Functional Partners:
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.944
FGF2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.745
SAMM50
SAMM50 sorting and assembly machinery component.
 
    
 0.624
NFYB
Nuclear transcription factor Y subunit beta.
      
 0.524
NT5DC3
5'-nucleotidase domain containing 3.
      
 0.521
HSP90B1
Heat shock protein 90 beta family member 1.
      
 0.518
FNDC3B
Fibronectin type III domain containing 3B.
      
 0.515
RPS13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
      
 0.515
TBRG4
Transforming growth factor beta regulator 4.
      
 0.499
DDX42
DEAD-box helicase 42.
   
 
 0.491
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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