STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC17Tetratricopeptide repeat domain 17. (1198 aa)    
Predicted Functional Partners:
API5
Apoptosis inhibitor 5.
 
    
 0.703
G3TGU0_LOXAF
PKD_channel domain-containing protein.
   
  
 0.703
GPHB5
Glycoprotein hormone subunit beta 5.
      
 0.690
VSIG10
V-set and immunoglobulin domain containing 10.
      
 0.598
HEATR5B
HEAT repeat containing 5B.
   
  
 0.579
UBFD1
Ubiquitin family domain containing 1.
      
 0.572
MCOLN2
Mucolipin 2.
    
 
 0.569
KIF3B
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.567
KIF3C
Kinesin family member 3C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.567
GLYATL3
Glycine-N-acyltransferase like 3.
      
 0.560
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.