Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXO5F-box protein 5. (442 aa)    
Predicted Functional Partners:
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.995
FZR1
Fizzy and cell division cycle 20 related 1.
   
 0.993
CDC16
Cell division cycle 16.
    
 0.991
CDC23
Cell division cycle 23.
  
 0.991
CDC26
Cell division cycle 26.
    
 0.991
CDC27
Cell division cycle 27.
   
 0.991
ANAPC16
Anaphase promoting complex subunit 16.
    
 0.991
ANAPC2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
    
 0.990
PLK1
Serine/threonine-protein kinase PLK.
   
 0.987
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.983
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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