STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXRED2FAD dependent oxidoreductase domain containing 2. (560 aa)    
Predicted Functional Partners:
TXNDC16
Thioredoxin domain containing 16.
    
 
 0.858
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.840
ERLEC1
Endoplasmic reticulum lectin 1.
    
 
 0.816
NDUFAF3
NADH:ubiquinone oxidoreductase complex assembly factor 3.
    
   0.787
OS9
OS9 endoplasmic reticulum lectin.
    
 
 0.775
VDAC2
Voltage dependent anion channel 2.
   
   0.737
FLNA
Filamin A.
    
   0.734
RASD2
RASD family member 2.
   
 
 0.661
HMGXB4
HMG-box containing 4.
      
 0.659
NDOR1
NADPH dependent diflavin oxidoreductase 1.
   
  
 0.645
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.