Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SP45_LOXAFIg-like domain-containing protein. (318 aa)    
Predicted Functional Partners:
FCER1G
Fc fragment of IgE receptor Ig.
   
 0.988
LYN
Tyrosine-protein kinase.
    
 0.980
COL1A1
Collagen type I alpha 1 chain.
     
 0.895
FYN
Tyrosine-protein kinase.
   
 0.888
PTK6
Tyrosine-protein kinase.
   
 0.888
COL3A1
Collagen type III alpha 1 chain.
     
 0.886
SYK
Tyrosine-protein kinase.
   
 0.881
COL6A2
Collagen type VI alpha 2 chain.
     
 0.871
G3T5N3_LOXAF
Uncharacterized protein.
     
 0.871
COL1A2
Collagen type I alpha 2 chain.
     
 0.871
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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