STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD3Potassium channel tetramerization domain containing 3. (792 aa)    
Predicted Functional Partners:
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.742
KCTD11
Potassium channel tetramerization domain containing 11.
    
 
 0.604
GPATCH2
G-patch domain containing 2.
      
 0.583
SPATA17
Spermatogenesis associated 17.
      
 0.579
G3TBM5_LOXAF
WD_REPEATS_REGION domain-containing protein.
      
 0.523
ST6GALNAC5
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
      
 0.519
LDB2
LIM domain binding 2.
      
 0.461
SHKBP1
SH3KBP1 binding protein 1.
  
 
  
0.447
FAM110A
Family with sequence similarity 110 member A.
      
 0.443
RRP15
Uncharacterized protein.
      
 0.441
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.