Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ZMYM6Zinc finger MYM-type containing 6. (1266 aa)    
Predicted Functional Partners:
AMDHD2
N-acetylglucosamine-6-phosphate deacetylase; Hydrolyzes the N-glycolyl group from N-glycolylglucosamine 6- phosphate (GlcNGc-6-P) in the N-glycolylneuraminic acid (Neu5Gc) degradation pathway.
      
 0.569
IQSEC2
IQ motif and Sec7 domain 2.
      
 0.569
PSMB1
Proteasome subunit beta.
      
 0.568
G3SRC7_LOXAF
Uncharacterized protein.
   
  
 0.519
TEX13A
RanBP2-type domain-containing protein.
      
 0.463
DR1
Down-regulator of transcription 1.
   
  
 0.452
QRICH1
Glutamine rich 1.
 
    
 0.425
NUDT8
Nudix hydrolase 8.
      
 0.419
SGSM3
Small G protein signaling modulator 3.
      
 0.419
RND1
Rho family GTPase 1.
      
 0.418
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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