STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CA12Carbonic anhydrase 12; Belongs to the alpha-carbonic anhydrase family. (322 aa)    
Predicted Functional Partners:
PVALB
Parvalbumin; Belongs to the parvalbumin family.
      
 0.694
RPF2
Ribosome production factor 2 homolog.
   
 
 0.529
CYP24A1
Cytochrome P450 family 24 subfamily A member 1; Belongs to the cytochrome P450 family.
   
 
 0.520
ZFAND5
Zinc finger AN1-type containing 5.
   
  
 0.491
ARHGAP29
Rho GTPase activating protein 29.
      
 0.482
NOC2L
Uncharacterized protein.
   
  
 0.466
CA4
Carbonic anhydrase 4; Belongs to the alpha-carbonic anhydrase family.
  
  
0.465
SORBS3
Sorbin and SH3 domain containing 3.
   
 
 0.465
GRWD1
Glutamate rich WD repeat containing 1.
   
  
 0.454
WDR43
WD repeat domain 43.
   
    0.441
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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