STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA9Spermatogenesis associated 9. (253 aa)    
Predicted Functional Partners:
SPATA16
Spermatogenesis associated 16.
      
 0.737
ZMAT5
Zinc finger matrin-type 5.
      
 0.737
PKDREJ
Polycystin family receptor for egg jelly.
      
 0.588
FLI1
Fli-1 proto-oncogene, ETS transcription factor.
      
 0.575
CCDC34
Uncharacterized protein.
      
 0.571
ODF2L
Outer dense fiber of sperm tails 2 like.
      
 0.542
KIF24
Kinesin family member 24; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.523
ASB6
Ankyrin repeat and SOCS box containing 6.
      
 0.521
SH2B3
SH2B adaptor protein 3.
      
 0.502
RNF123
Ring finger protein 123.
      
 0.502
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.