STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D15TBC1 domain family member 15. (674 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.973
TBC1D17
TBC1 domain family member 17.
  
 
0.956
GABARAP
GABA type A receptor-associated protein.
   
 0.951
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.951
FIS1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
    
 0.951
G3U4T1_LOXAF
Uncharacterized protein.
     
 0.927
RAB7B
RAB7B, member RAS oncogene family.
   
 0.710
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.639
PPP1R13B
Protein phosphatase 1 regulatory subunit 13B.
      
 0.572
RAB9B
RAB9B, member RAS oncogene family.
   
 0.550
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.