STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FIBCD1Fibrinogen C domain containing 1. (461 aa)    
Predicted Functional Partners:
CLEC1A
C-type lectin domain family 1 member A.
   
 0.820
LYSMD3
LysM domain containing 3.
      
 0.737
MRC1
Mannose receptor C-type 1.
   
 0.644
WFIKKN2
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2.
      
 0.625
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
   
 0.602
C1QL2
Complement C1q like 2.
   
 0.561
SKI
SKI proto-oncogene.
   
  
 0.559
KLRF1
Killer cell lectin like receptor F1.
   
 0.555
CLECL1
C-type lectin domain-containing protein.
   
 0.555
PTX3
Pentraxin 3.
    
 
 0.548
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.