POLRMT protein (Loxodonta africana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

POLRMT

DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1215 aa)

Predicted Functional Partners:

TFB2M

0.997

TFAM

0.993

POLG2

0.936

TEFM

0.899

TFB1M

0.896

G3TXB4_LOXAF

0.896

TWNK

0.852

SRFBP1

0.841

POLR1B

0.838

POLG

0.822

Your Current Organism:

Loxodonta africana

NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3TXB4_LOXAF	POLRMT	ENSLAFP00000020222	ENSLAFP00000001557	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.896
G3TXB4_LOXAF	TFAM	ENSLAFP00000020222	ENSLAFP00000010781	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Transcription factor A, mitochondrial.	0.692
G3TXB4_LOXAF	TFB2M	ENSLAFP00000020222	ENSLAFP00000012615	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.615
POLG	POLG2	ENSLAFP00000008562	ENSLAFP00000009384	DNA polymerase gamma, catalytic subunit.	DNA polymerase gamma 2, accessory subunit.	0.998
POLG	POLRMT	ENSLAFP00000008562	ENSLAFP00000001557	DNA polymerase gamma, catalytic subunit.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.822
POLG	TFAM	ENSLAFP00000008562	ENSLAFP00000010781	DNA polymerase gamma, catalytic subunit.	Transcription factor A, mitochondrial.	0.657
POLG	TWNK	ENSLAFP00000008562	ENSLAFP00000013299	DNA polymerase gamma, catalytic subunit.	Twinkle mtDNA helicase.	0.930
POLG2	POLG	ENSLAFP00000009384	ENSLAFP00000008562	DNA polymerase gamma 2, accessory subunit.	DNA polymerase gamma, catalytic subunit.	0.998
POLG2	POLRMT	ENSLAFP00000009384	ENSLAFP00000001557	DNA polymerase gamma 2, accessory subunit.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.936
POLG2	TFAM	ENSLAFP00000009384	ENSLAFP00000010781	DNA polymerase gamma 2, accessory subunit.	Transcription factor A, mitochondrial.	0.564
POLG2	TFB2M	ENSLAFP00000009384	ENSLAFP00000012615	DNA polymerase gamma 2, accessory subunit.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.553
POLG2	TWNK	ENSLAFP00000009384	ENSLAFP00000013299	DNA polymerase gamma 2, accessory subunit.	Twinkle mtDNA helicase.	0.900
POLR1B	POLRMT	ENSLAFP00000006438	ENSLAFP00000001557	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.838
POLR1B	TFB2M	ENSLAFP00000006438	ENSLAFP00000012615	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.503
POLRMT	G3TXB4_LOXAF	ENSLAFP00000001557	ENSLAFP00000020222	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.896
POLRMT	POLG	ENSLAFP00000001557	ENSLAFP00000008562	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	DNA polymerase gamma, catalytic subunit.	0.822
POLRMT	POLG2	ENSLAFP00000001557	ENSLAFP00000009384	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	DNA polymerase gamma 2, accessory subunit.	0.936
POLRMT	POLR1B	ENSLAFP00000001557	ENSLAFP00000006438	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.838
POLRMT	SRFBP1	ENSLAFP00000001557	ENSLAFP00000012818	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	Serum response factor binding protein 1.	0.841
POLRMT	TEFM	ENSLAFP00000001557	ENSLAFP00000016482	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	Transcription elongation factor, mitochondrial.	0.899

page 1 of 3

Server load: low (16%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About