STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMPXSmall muscle protein X-linked. (86 aa)    
Predicted Functional Partners:
MYOZ2
Myozenin 2.
   
  
 0.793
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.761
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
  
 0.758
ITGB1BP2
Integrin subunit beta 1 binding protein 2.
   
  
 0.742
ACTN2
Actinin alpha 2.
   
  
 0.719
MGP
Matrix Gla protein; Associates with the organic matrix of bone and cartilage.
      
 0.711
TSPEAR
Thrombospondin type laminin G domain and EAR repeats.
      
 0.646
MYOM2
Myomesin 2.
   
  
 0.643
MYL1
Myosin light chain 1.
   
  
 0.611
PDK3
Protein-serine/threonine kinase.
      
 0.584
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.