STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPXSmall muscle protein X-linked. (86 aa)    
Predicted Functional Partners:
MYH7B
Myosin heavy chain 7B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.743
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.709
SERPINC1
Serpin family C member 1; Belongs to the serpin family.
      
 0.678
MYOZ2
Myozenin 2.
   
  
 0.674
ITGB1BP2
Integrin subunit beta 1 binding protein 2.
   
  
 0.672
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
  
 0.640
TSPEAR
Thrombospondin type laminin G domain and EAR repeats.
      
 0.571
ACTN2
Actinin alpha 2.
   
  
 0.549
MYOM2
Myomesin 2.
   
  
 0.547
CASQ2
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
  
 0.545
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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