STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A13Solute carrier family 22 member 13. (516 aa)    
Predicted Functional Partners:
SPCS3
Signal peptidase complex subunit 3.
    
   0.656
SLC22A18
Solute carrier family 22 member 18.
   
 0.536
SLC16A6
Solute carrier family 16 member 6.
   
 
 0.504
SLC16A14
Solute carrier family 16 member 14.
    
 
 0.500
XYLB
Xylulokinase.
   
  
 0.478
INTS1
Integrator complex subunit 1.
    
 0.452
SLC34A1
Solute carrier family 34 member 1.
   
 0.451
INTS9
Integrator complex subunit 9.
    
 0.446
INTS11
Integrator complex subunit 11.
    
 0.443
SLC5A8
Solute carrier family 5 member 8; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
 
 0.442
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.